Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record HQ287563.1:
Cluster 1Nrps135298

Cluster 1 - Nrps

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp) + (nrp) + (nrp) + (leu)
npsP3
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: gly
Minowa: hpg
consensus: nrp

npsP5
NRPSPredictor2 SVM: N/A
Stachelhaus code: ser
Minowa: dab
consensus: nrp

npsP6
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: gln
Minowa: ala
consensus: nrp

npsP8
NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: leu
Minowa: leu
consensus: leu

Database cross-links

Gene cluster description

Gene Cluster 1. Type = nrps. Location: 1 - 35298 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters