Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record AY328023.1:
Cluster 1Nrps-transatpks175778

Cluster 1 - Nrps-transatpks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk) + (mal) + (gly) + (arg)
pedC
PKS signature: N/A
Minowa: mal
consensus: pk

pedD
PKS signature: mal
Minowa: mal
consensus: mal

pedF
NRPSPredictor2 SVM: gly
Stachelhaus code: gly
Minowa: gly
consensus: gly

pedH
NRPSPredictor2 SVM: glu,gln
Stachelhaus code: arg
Minowa: arg
consensus: arg

Database cross-links

Gene cluster description

Gene Cluster 1. Type = nrps-transatpks. Location: 1 - 75778 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
transatpks: ((PKS_KS & ATd) or (ene_KS & ATd) or (mod_KS & ATd) or (hyb_KS & ATd) or (itr_KS & ATd) or (tra_KS & ATd))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters