Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record AJ561198.1:
Cluster 1Nrps-t3pks487089153

Cluster 1 - Nrps-t3pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(dhpg) + (hpg-tyr) + (hpg-hpg-tyr) + (dhpg)
dbv16
NRPSPredictor2 SVM: dhpg
Stachelhaus code: dhpg
Minowa: dhpg
consensus: dhpg

dbv17
NRPSPredictor2 SVM: hpg
Stachelhaus code: hpg
Minowa: hpg
consensus: hpg

NRPSPredictor2 SVM: hpg
Stachelhaus code: hpg
Minowa: hpg
consensus: hpg

NRPSPredictor2 SVM: tyr
Stachelhaus code: tyr
Minowa: bht
consensus: tyr

dbv25
NRPSPredictor2 SVM: hpg
Stachelhaus code: hpg
Minowa: hpg
consensus: hpg

NRPSPredictor2 SVM: tyr
Stachelhaus code: tyr
Minowa: tyr
consensus: tyr

dbv26
NRPSPredictor2 SVM: dhpg
Stachelhaus code: dpg
Minowa: dhpg
consensus: dhpg

Database cross-links

Look up in NORINE database

Gene cluster description

Download cluster GenBank file
Gene Cluster 1. Type = nrps-t3pks. Location: 4870 - 89153 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t3pks: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters