Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record AF204805.2:
Cluster 1Nrps-t1pks140989

Cluster 1 - Nrps-t1pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(ile-ser-pro-leu) + (mal) + (leu-gly-asn) + (tyr-pro)
nosA
NRPSPredictor2 SVM: ile
Stachelhaus code: ile
Minowa: ile
consensus: ile

NRPSPredictor2 SVM: ser
Stachelhaus code: ser
Minowa: ser
consensus: ser

NRPSPredictor2 SVM: pro
Stachelhaus code: pro
Minowa: mpro
consensus: pro

NRPSPredictor2 SVM: leu
Stachelhaus code: leu
Minowa: leu
consensus: leu

nosB
PKS signature: mal
Minowa: mal
consensus: mal

nosC
NRPSPredictor2 SVM: leu
Stachelhaus code: leu
Minowa: leu
consensus: leu

NRPSPredictor2 SVM: gly
Stachelhaus code: gly
Minowa: gly
consensus: gly

NRPSPredictor2 SVM: asn
Stachelhaus code: asn
Minowa: asn
consensus: asn

nosD
NRPSPredictor2 SVM: tyr
Stachelhaus code: tyr
Minowa: phe
consensus: tyr

NRPSPredictor2 SVM: pro
Stachelhaus code: pro
Minowa: mpro
consensus: pro

Database cross-links

Look up in NORINE database

Gene cluster description

Download cluster GenBank file
Gene Cluster 1. Type = nrps-t1pks. Location: 1 - 40989 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t1pks: ((PKS_KS & PKS_AT) or (ene_KS & PKS_AT) or (mod_KS & PKS_AT) or (hyb_KS & PKS_AT) or (itr_KS & PKS_AT) or (tra_KS & PKS_AT))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters